Pairwise Orthologs for SALSA08870

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SALSA08870 (A0A1S3KP09)

E Salmo salar | Semaphorin-4B-like [LOC106561177]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salmo trutta	SALTR13603		A0A674CJG1
			E	Drosophila melanogaster	DROME05835		A0A0B4KG38
			E	Petromyzon marinus	PETMA01108		S4RZV8
			E	Eptatretus burgeri	EPTBU05416		ENSEBUG00000004427.1
			E	Scyliorhinus torazame	SCYTO02526		A0A401PJZ8
			E	Chiloscyllium punctatum	CHIPU16196		A0A401T5A4
			E	Callorhinchus milii	CALMI03763		A0A4W3GS37
			E	Anguilla anguilla	ANGAN51797		XP_035251786
			E	Anabas testudineus	ANATE22188		A0A3Q1HUG1
			E	Seriola dumerili	SERDU10605		A0A3B4UC13
			E	Echeneis naucrates	ECHNA53691		A0A665UXQ6
			E	Cynoglossus semilaevis	CYNSE24628		A0A3P8WA32
			E	Scophthalmus maximus	SCOMX00832		A0A8D2ZHN0
			E	Dicentrarchus labrax	DICLA41741		A0A8C4ES08
			E	Gasterosteus aculeatus	GASAC15641		G3P9P0
			E	Sparus aurata	SPAAU44849		A0A671XDU4
			E	Mola mola	MOLML15726		A0A3Q3WK39
			E	Tetraodon nigroviridis	TETNG03659		H3C161
			E	Oryzias javanicus	ORYJA32788		ENSOJAG00000017256.1
			E	Oryzias latipes	ORYLA14968		ENSORLG00000008247
			E	Oryzias melastigma	ORYME03831		A0A3B3E185
			E	Nothobranchius furzeri	NOTFU21049		A0A8C6LDQ6
			E	Kryptolebias marmoratus	KRYMA03202		A0A3Q3AXR3
			E	Cyprinodon variegatus	CYPVA26461		A0A3Q2D1B6
			E	Gambusia affinis	GAMAF20495		ENSGAFG00000001291.1

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