Pairwise Orthologs for SALFA18897

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SALFA18897 (A0A672I0W8)

E Salarias fasciatus | Neuromedin-K receptor

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Spizellomyces punctatus	SPIPN00330		SPPG_00350
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD00813		A0A0L0HU57
			E	Branchiostoma floridae	BRAFL07287		C3YFS0
			E	Branchiostoma lanceolatum	BRALA27744		BL20052
			E	Petromyzon marinus	PETMA01756		S4RS17
			E	Chiloscyllium punctatum	CHIPU08165		A0A401SHD7
			E	Lepisosteus oculatus	LEPOC12921		W5N2C3
			E	Anabas testudineus	ANATE15372		ENSATEG00000016537.1
			E	Seriola dumerili	SERDU27795		A0A3B4TCU9
			E	Cynoglossus semilaevis	CYNSE29792		A0A3P8ULB8
			E	Scophthalmus maximus	SCOMX30889		A0A2U9BNI5
			E	Dicentrarchus labrax	DICLA45550		A0A8P4K3S1
			E	Gasterosteus aculeatus	GASAC16344		G3Q0D9
			E	Sparus aurata	SPAAU55127		A0A671ULJ0
			E	Mola mola	MOLML01811		A0A3Q3W3Y2
			E	Takifugu rubripes	TAKRU16561		A0A674NTT8
			E	Tetraodon nigroviridis	TETNG07028		H3DL20
			E	Oryzias javanicus	ORYJA20443		A0A437DMU1
			E	Oryzias latipes	ORYLA18720		ENSORLG00000020412
			E	Oryzias melastigma	ORYME28409		A0A3B3BKM4
			E	Nothobranchius furzeri	NOTFU04093		A0A1A8B6V3
			E	Kryptolebias marmoratus	KRYMA00165		A0A3Q2ZBV7
			E	Cyprinodon variegatus	CYPVA15161		A0A3Q2CBA7
			E	Gambusia affinis	GAMAF23008		ENSGAFG00000005610.1
			E	Poecilia reticulata	POERE16243		A0A3P9NE26

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