Pairwise Orthologs for SAIBB24489

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SAIBB24489 (A0A2K6U995)

E Saimiri boliviensis boliviensis | Phospholipase A2 [PLA2G2A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Procavia capensis	PROCA00301		ENSPCAG00000005522
			E	Echinops telfairi	ECHTE02954		ENSETEG00000013397
			E	Ochotona princeps	OCHPR01923		ENSOPRG00000016641
			E	Dipodomys ordii	DIPOR06139		ENSDORG00000001096.2
			E	Cavia aperea	CAVAP08977		ENSCAPG00000016607.1
			E	Chinchilla lanigera	CHILA13275		A0A8C2VI77
			E	Octodon degus	OCTDE15767		A0A6P6F1I1
			E	Jaculus jaculus	JACJA08863		A0A8C5P384
			E	Cricetulus griseus	CRIGR16021		G3HU37
			E	Mus musculus	MOUSE41569		ENSMUSG00000058908.1
			E	Rattus norvegicus	RATNO32904		PA2GA_RAT
			E	Nannospalax galili	NANGA18123		A0A8C6Q919
			E	Ictidomys tridecemlineatus	ICTTR08790		I3N450
			E	Cercocebus atys	CERAT06488		A0A2K5M5E1
			E	Chlorocebus sabaeus	CHLSB09297		A0A0D9S8D2
			E	Macaca fascicularis	MACFA23336		A0A2K5WTV2
			E	Macaca mulatta	MACMU21255		A0A8J8Y2L8
			E	Macaca nemestrina	MACNE33862		A0A2K6AMS3
			E	Mandrillus leucophaeus	MANLE37235		A0A2K6ADR3
			E	Colobus angolensis palliatus	COLAP24369		A0A2K5J931
			E	Rhinopithecus bieti	RHIBE04716		A0A2K6M1N3
			E	Rhinopithecus roxellana	RHIRO19285		A0A2K6QZD0
			E	Gorilla gorilla gorilla	GORGO17538		G3QZ00
			E	Homo sapiens	HUMAN47855		PA2GA_HUMAN
			E	Pan paniscus	PANPA00486		A0A2R8ZCM9

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