Pairwise Orthologs for SAIBB07078

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SAIBB07078 (A0A2K6SEL2)

E Saimiri boliviensis boliviensis | DNA polymerase [POLA1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA08394		L8GWY4
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP05802		D3BMP9
			E	Dictyostelium discoideum	DICDI06890		DPOLA_DICDI
			E	Dictyostelium purpureum	DICPU08616		F0ZVS2
			E	Tieghemostelium lacteum	TIELA05579		A0A152A6I2
			E	Thecamonas trahens ATCC 50062	THETB01438		A0A0L0DRB9
			E	Guillardia theta	GUITH06722		EKX37013
			E	Guillardia theta (strain CCMP2712)	GUITC18614		L1IL77
			E	Bodo saltans	BODSA02587		A0A0S4IUC6
			E	Leishmania donovani (strain BPK282A1)	LEIDB05767		A0A3S5H6Z2
			E	Leishmania infantum	LEIIN05617		A0A6L0X847
			E	Leishmania major strain Friedlin	LEIMA01099		Q4QEL1
			E	Leishmania mexicana (strain MHOM/GT/2001/U1103)	LEIMU01063		E9AQW7
			E	Leishmania braziliensis	LEIBR05609		A4H8T3
			E	Leptomonas pyrrhocoris	LEPPY08741		A0A0M9FXG1
			E	Leptomonas seymouri	LEPSE04056		A0A0N1I597
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC04142		Q4DUF0
			E	Naegleria fowleri	NAEFO07540		A0A6A5C8Q2
			E	Naegleria gruberi strain NEG-M	NAEGR05573		D2UXH8
			E	Diacronema lutheri	DIALT06045		A0A8J6CAH7
			E	Emiliania huxleyi CCMP1516	EMIHU11677		estExtDG_Genemark1.C
			E	Trichomonas vaginalis G3	TRIVA29862		A2FME7
			E	Monosiga brevicollis	MONBE00003		A9UV20
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR509532		F2UMK2
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO301185		CAOG_01187

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