Pairwise Orthologs for RHIRO12124

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIRO12124 (A0A2K6PTT0)

E Rhinopithecus roxellana | Diacylglycerol kinase [DGKG]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN14028		XP_035265350
			E	Seriola dumerili	SERDU03365		A0A3B4UUX4
			E	Echeneis naucrates	ECHNA13384		A0A665WU17
			E	Scophthalmus maximus	SCOMX07521		ENSSMAG00000012317.1
			E	Dicentrarchus labrax	DICLA13796		XP_051260353
			E	Sparus aurata	SPAAU29620		A0A671YZC9
			E	Oryzias melastigma	ORYME34529		A0A3B3DXC2
			E	Nothobranchius furzeri	NOTFU22053		A0A1A7ZP65
			E	Gambusia affinis	GAMAF27658		ENSGAFG00000017084.1
			E	Poecilia formosa	POEFO15632		A0A087YJS4
			E	Xiphophorus maculatus	XIPMA33102		A0A3B5Q2M9
			E	Salarias fasciatus	SALFA50335		A0A672HNI7
			E	Astatotilapia calliptera	ASTCA12181		A0A3P8QUF9
			E	Haplochromis burtoni	HAPBU17501		A0A3Q2V5T2
			E	Neolamprologus brichardi	NEOBR26153		A0A3Q4HB76
			E	Oreochromis aureus	OREAU44037		A0A668TFG0
			E	Oreochromis niloticus	ORENI22509		A0A669EQL7
			E	Amphilophus citrinellus	AMPCI20702		A0A3Q0SJD7
			E	Amphiprion percula	AMPPE03584		A0A3P8T5D8
			E	Gadus morhua	GADMO31457		A0A8C5AJ55
			E	Esox lucius	ESOLU47342		A0A3P8XM39
			E	Salmo trutta	SALTR11055		A0A674CR27
			E	Cyprinus carpio carpio	CYPCA44062		A0A9J8CRZ1
			E	Sinocyclocheilus grahami	SINGR62445		A0A672PNU6
			E	Latimeria chalumnae	LATCH14765		H3B9E6

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