Pairwise Orthologs for RHIFE16752

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE16752 (A0A671FPL6)

E Rhinolophus ferrumequinum | Semaphorin 3G [SEMA3G]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA04755		S4RM65
			E	Eptatretus burgeri	EPTBU23940		A0A8C4ND36
			E	Scyliorhinus torazame	SCYTO12423		A0A401NFP9
			E	Chiloscyllium punctatum	CHIPU13481		A0A401SXK4
			E	Lepisosteus oculatus	LEPOC14287		W5NAH6
			E	Anguilla anguilla	ANGAN39127		XP_035238964
			E	Anabas testudineus	ANATE20170		A0A3Q1I0N3
			E	Seriola dumerili	SERDU32772		A0A3B4VSA6
			E	Echeneis naucrates	ECHNA01085		A0A665U3S8
			E	Cynoglossus semilaevis	CYNSE01885		A0A3P8V2J2
			E	Scophthalmus maximus	SCOMX02076		ENSSMAG00000010988.1
			E	Dicentrarchus labrax	DICLA32847		A0A8C4INJ5
			E	Gasterosteus aculeatus	GASAC11458		G3NR19
			E	Sparus aurata	SPAAU53364		A0A671YRX2
			E	Mola mola	MOLML17448		A0A3Q4BM11
			E	Takifugu rubripes	TAKRU36147		A0A674P003
			E	Oryzias javanicus	ORYJA19865		A0A3S2PA85
			E	Oryzias latipes	ORYLA15543		ENSORLG00000003333
			E	Oryzias melastigma	ORYME05023		A0A3B3D6N1
			E	Nothobranchius furzeri	NOTFU23453		A0A8C6PJ99
			E	Kryptolebias marmoratus	KRYMA11409		A0A3Q3AGC8
			E	Cyprinodon variegatus	CYPVA26998		A0A3Q2EG95
			E	Gambusia affinis	GAMAF18190		ENSGAFG00000019054.1
			E	Poecilia reticulata	POERE04979		A0A3P9N8K3
			E	Xiphophorus maculatus	XIPMA15501		M4AY03

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