Pairwise Orthologs for RHIFE10540

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE10540 (A0A671DV18)

E Rhinolophus ferrumequinum | Tumor necrosis factor [TNF]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU01425		A0A8C4R1Y1
			E	Gasterosteus aculeatus	GASAC13992		G3NHD0
			E	Tetraodon nigroviridis	TETNG16156		H3C0Z1
			E	Neolamprologus brichardi	NEOBR17512		A0A3Q4H910
			E	Oreochromis aureus	OREAU47697		A0A668SM55
			E	Oreochromis niloticus	ORENI05454		Q5VJN5
			E	Cyprinus carpio carpio	CYPCA92538		A0A8C0YPY8
			E	Sinocyclocheilus grahami	SINGR103030		A0A672K6R5
			E	Ornithorhynchus anatinus	ORNAN32909		A7X5T9
			E	Tachyglossus aculeatus	TACAU26855		XP_038624913
			E	Procavia capensis	PROCA03157		ENSPCAG00000007543
			E	Loxodonta africana	LOXAF01866		G3T0Q6
			E	Echinops telfairi	ECHTE06133		ENSETEG00000003192
			E	Oryctolagus cuniculus	RABIT02187		TNFA_RABIT
			E	Ochotona princeps	OCHPR13203		ENSOPRG00000011953
			E	Dipodomys ordii	DIPOR20945		ENSDORG00000012458.2
			E	Fukomys damarensis	FUKDA21839		A0A091CRZ8
			E	Heterocephalus glaber	HETGA14691		ENSHGLG00100012742.1
			E	Cavia aperea	CAVAP06633		ENSCAPG00000014417.1
			E	Cavia porcellus	CAVPO08877		A0A2C9F1D8
			E	Chinchilla lanigera	CHILA10043		A0A8C2VYS8
			E	Octodon degus	OCTDE02199		ENSODEG00000017865.1
			E	Cricetulus griseus	CRIGR18076		G3HZG9
			E	Mus musculus	MOUSE20698		TNFA_MOUSE
			E	Rattus norvegicus	RATNO21568		TNFA_RAT

Showing 1 to 25 of 25 rows rows per page