Pairwise Orthologs for RHIFE09653

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE09653 (A0A671EQF6)

E Rhinolophus ferrumequinum | Carbohydrate sulfotransferase [CHST11]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)	METCA00590		WP_010959968
			E	Branchiostoma floridae	BRAFL14275		A0A9J7L3K1
			E	Branchiostoma lanceolatum	BRALA19418		BL28092
			E	Scyliorhinus torazame	SCYTO03115		A0A401PLP6
			E	Chiloscyllium punctatum	CHIPU10682		A0A401SPI6
			E	Callorhinchus milii	CALMI18796		V9KPY1
			E	Lepisosteus oculatus	LEPOC16180		W5ND03
			E	Anguilla anguilla	ANGAN27687		A0A9D3RVL7
			E	Anabas testudineus	ANATE01956		ENSATEG00000023620.1
			E	Seriola dumerili	SERDU04257		A0A3B4V823
			E	Echeneis naucrates	ECHNA42620		A0A665WG89
			E	Cynoglossus semilaevis	CYNSE28420		A0A3P8UVU8
			E	Scophthalmus maximus	SCOMX20908		ENSSMAG00000015693.1
			E	Dicentrarchus labrax	DICLA50829		XP_051248529
			E	Gasterosteus aculeatus	GASAC21449		G3Q6Q1
			E	Sparus aurata	SPAAU49105		A0A671WIQ6
			E	Mola mola	MOLML00868		A0A3Q3W4Q4
			E	Takifugu rubripes	TAKRU18702		H2T556
			E	Tetraodon nigroviridis	TETNG15061		H3CIM2
			E	Oryzias javanicus	ORYJA04778		A0A437C126
			E	Oryzias latipes	ORYLA10949		ENSORLG00000011953
			E	Oryzias melastigma	ORYME26200		A0A3B3CD62
			E	Nothobranchius furzeri	NOTFU01193		A0A1A8A100
			E	Kryptolebias marmoratus	KRYMA17513		A0A3Q3ACY0
			E	Gambusia affinis	GAMAF26130		ENSGAFG00000020013.1

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