Pairwise Orthologs for RHIFE09151

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE09151 (A0A671E5P1)

E Rhinolophus ferrumequinum | protein-tyrosine-phosphatase [PTPRR]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU00823		A0A401RWD9
			E	Callorhinchus milii	CALMI31971		A0A4W3KJ74
			E	Lepisosteus oculatus	LEPOC16638		W5NHA0
			E	Anguilla anguilla	ANGAN57418		XP_035258072
			E	Anabas testudineus	ANATE02720		ENSATEG00000023588.1
			E	Seriola dumerili	SERDU03466		A0A3B4ULA4
			E	Echeneis naucrates	ECHNA41521		A0A665TL16
			E	Cynoglossus semilaevis	CYNSE29318		A0A3P8WXK1
			E	Scophthalmus maximus	SCOMX21476		ENSSMAG00000007255.1
			E	Dicentrarchus labrax	DICLA28003		A0A8C4GG99
			E	Gasterosteus aculeatus	GASAC00637		G3PSZ1
			E	Sparus aurata	SPAAU48997		A0A671WCW8
			E	Mola mola	MOLML00417		A0A3Q3VX95
			E	Tetraodon nigroviridis	TETNG15845		H3C9X7
			E	Oryzias javanicus	ORYJA05443		ENSOJAG00000023016.1
			E	Oryzias latipes	ORYLA11285		ENSORLG00000017389
			E	Oryzias melastigma	ORYME26759		A0A3B3DZX7
			E	Kryptolebias marmoratus	KRYMA26776		A0A3Q2ZQL7
			E	Gambusia affinis	GAMAF30926		ENSGAFG00000004062.1
			E	Poecilia formosa	POEFO18546		A0A087XYZ8
			E	Poecilia reticulata	POERE20832		A0A3P9NGH9
			E	Salarias fasciatus	SALFA08736		A0A672FB90
			E	Astatotilapia calliptera	ASTCA14227		A0A3P8P7D9
			E	Haplochromis burtoni	HAPBU29491		A0A3Q3CUC4
			E	Oreochromis niloticus	ORENI26138		I3JUC9

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