Pairwise Orthologs for RHIFE08585

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RHIFE08585 (A0A671DPU1)

E Rhinolophus ferrumequinum | Keratin 77 [KRT77]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Glutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / NCIMB 14258 / Re117)	GLUAR02057		A0A2N7S2Y7
			B	Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)	HALO100531		Hoch_0535
			E	Loxodonta africana	LOXAF19385		G3T5Z6
			E	Echinops telfairi	ECHTE06931		ENSETEG00000013943
			E	Dipodomys ordii	DIPOR20792		ENSDORG00000003118.2
			E	Fukomys damarensis	FUKDA17215		ENSFDAG00000018748.1
			E	Cavia porcellus	CAVPO05667		A0A286XDJ5
			E	Chinchilla lanigera	CHILA14749		A0A8C2VZZ9
			E	Octodon degus	OCTDE16153		ENSODEG00000011925.1
			E	Jaculus jaculus	JACJA00847		A0A8C5KLA4
			E	Cricetulus griseus	CRIGR26058		ENSCGRG00000016040.1
			E	Mus musculus	MOUSE16747		K2C1B_MOUSE
			E	Rattus norvegicus	RATNO38481		A0A0G2JZQ9
			E	Nannospalax galili	NANGA19077		A0A8C6QCK1
			E	Ictidomys tridecemlineatus	ICTTR08449		ENSSTOG00000006531
			E	Cercocebus atys	CERAT25030		A0A2K5KW13
			E	Chlorocebus sabaeus	CHLSB02228		A0A0D9QZZ8
			E	Macaca fascicularis	MACFA03205		ENSMFAG00000044745.1
			E	Macaca mulatta	MACMU05070		A0A1D5R845
			E	Macaca nemestrina	MACNE24303		A0A2K6C019
			E	Mandrillus leucophaeus	MANLE15580		A0A2K5YE01
			E	Papio anubis	PAPAN40565		A0A096MN47
			E	Colobus angolensis palliatus	COLAP22375		A0A2K5JPH1
			E	Rhinopithecus bieti	RHIBE20647		A0A2K6KTC9
			E	Rhinopithecus roxellana	RHIRO08898		A0A2K6Q2D4

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