Pairwise Orthologs for RATNO39699

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO39699 (M0RDI4)

E Rattus norvegicus | Zinc finger protein 647 [Zfp647]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01)	PARBA00800		C1GQL3
			E	Cynoglossus semilaevis	CYNSE10386		A0A3P8X086
			E	Kryptolebias marmoratus	KRYMA19946		A0A3Q2ZBA7
			E	Cyprinodon variegatus	CYPVA16521		A0A3Q2DXD6
			E	Gambusia affinis	GAMAF30592		ENSGAFG00000018302.1
			E	Cyprinus carpio carpio	CYPCA01581		A0A9J7ZS03
			E	Danio rerio	DANRE32428		ENSDARG00000114108.1
			E	Procavia capensis	PROCA05510		ENSPCAG00000000092
			E	Loxodonta africana	LOXAF01056		G3THF5
			E	Echinops telfairi	ECHTE08048		ENSETEG00000012126
			E	Ochotona princeps	OCHPR01079		ENSOPRG00000014807
			E	Dipodomys ordii	DIPOR23176		ENSDORG00000003353.2
			E	Fukomys damarensis	FUKDA08564		ENSFDAG00000006421.1
			E	Heterocephalus glaber	HETGA10449		ENSHGLG00100011157.1
			E	Cavia aperea	CAVAP15856		ENSCAPG00000013626.1
			E	Cavia porcellus	CAVPO21681		A0A286XAA7
			E	Chinchilla lanigera	CHILA13762		A0A8C2VHH7
			E	Octodon degus	OCTDE17503		A0A6P6F639
			E	Jaculus jaculus	JACJA07613		A0A8C5KBC4
			E	Cricetulus griseus	CRIGR26687		ENSCGRG00000019926.1
			E	Mus musculus	MOUSE16585		ZN250_MOUSE
			E	Nannospalax galili	NANGA20759		A0A8C6S425
			E	Ictidomys tridecemlineatus	ICTTR03127		ENSSTOG00000013450
			E	Cercocebus atys	CERAT34350		A0A2K5M7V0
			E	Chlorocebus sabaeus	CHLSB17512		A0A0D9R761

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