Pairwise Orthologs for RATNO36331

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO36331 (A0A0G2K899)

E Rattus norvegicus | Acylphosphatase [Acyp1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL00085		A0A9J7MA18
			E	Scophthalmus maximus	SCOMX11208		ENSSMAG00000004715.1
			E	Mola mola	MOLML08260		A0A3Q4ABU6
			E	Gambusia affinis	GAMAF08665		ENSGAFG00000016990.1
			E	Poecilia formosa	POEFO04619		A0A087YAR9
			E	Poecilia reticulata	POERE20194		A0A3P9NX72
			E	Xiphophorus maculatus	XIPMA14254		A0A3B5Q242
			E	Astatotilapia calliptera	ASTCA18487		A0A3P8R4B6
			E	Haplochromis burtoni	HAPBU03942		A0A3Q2X1R2
			E	Neolamprologus brichardi	NEOBR06197		A0A3Q4GPG7
			E	Oreochromis niloticus	ORENI32514		A0A669B200
			E	Hippocampus comes	HIPCM20375		A0A3Q2ZE24
			E	Latimeria chalumnae	LATCH19952		H3BG22
			E	Tachyglossus aculeatus	TACAU24790		XP_038621699
			E	Loxodonta africana	LOXAF16097		G3THC9
			E	Echinops telfairi	ECHTE14826		ENSETEG00000010601
			E	Oryctolagus cuniculus	RABIT09009		ENSOCUG00000010190.2
			E	Ochotona princeps	OCHPR15603		ENSOPRG00000011940
			E	Dipodomys ordii	DIPOR01733		A0A1S3F6N5
			E	Fukomys damarensis	FUKDA02353		ENSFDAG00000013464.1
			E	Heterocephalus glaber	HETGA01550		A0A0P6JHC2
			E	Cavia porcellus	CAVPO10502		A0A286XM87
			E	Chinchilla lanigera	CHILA22106		A0A8C2UVJ0
			E	Octodon degus	OCTDE01494		A0A6P6DHN9
			E	Jaculus jaculus	JACJA00410		A0A8C5NXK3

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