Pairwise Orthologs for RATNO31497

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO31497 (A6IM48)

E Rattus norvegicus | C-type lectin domain family 1 member A | Similar to C-type lectin-like receptor-1 (Predicte [Clec1a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Poecilia formosa	POEFO12403		A0A087XQG7
			E	Ornithorhynchus anatinus	ORNAN09201		A0A6I8P2W0
			E	Tachyglossus aculeatus	TACAU18755		XP_038615585
			E	Procavia capensis	PROCA07639		ENSPCAG00000003479
			E	Loxodonta africana	LOXAF14161		G3SSL8
			E	Oryctolagus cuniculus	RABIT12263		G1TCD2
			E	Ochotona princeps	OCHPR05880		ENSOPRG00000015366
			E	Fukomys damarensis	FUKDA19748		ENSFDAG00000001356.1
			E	Heterocephalus glaber	HETGA20143		ENSHGLG00100004146.1
			E	Cavia aperea	CAVAP09558		ENSCAPG00000007941.1
			E	Cavia porcellus	CAVPO12847		A0A286Y1W9
			E	Chinchilla lanigera	CHILA04331		A0A8C2W4G7
			E	Octodon degus	OCTDE03192		A0A6P3V9Z4
			E	Jaculus jaculus	JACJA20565		A0A8C5LBD9
			E	Cricetulus griseus	CRIGR19035		ENSCGRG00000018367.1
			E	Mus musculus	MOUSE49223		CLC1A_MOUSE
			E	Nannospalax galili	NANGA25290		A0A8C6W8L2
			E	Ictidomys tridecemlineatus	ICTTR15880		I3M6F2
			E	Cercocebus atys	CERAT39965		A0A2K5KUB6
			E	Chlorocebus sabaeus	CHLSB01940		A0A0D9R9Y6
			E	Macaca fascicularis	MACFA02511		ENSMFAG00000033898.1
			E	Macaca mulatta	MACMU03725		H9Z9Q7
			E	Macaca nemestrina	MACNE16797		A0A2K6CBX6
			E	Mandrillus leucophaeus	MANLE19784		A0A2K5YHZ6
			E	Papio anubis	PAPAN41778		A0A096MZR8

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