Pairwise Orthologs for RATNO30986

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO30986 (Q6AYL7)

E Rattus norvegicus | Polypeptide N-acetylgalactosaminyltransferase-like [Galntl5]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Paenibacillus mucilaginosus (strain KNP414)	PAEMK04457		WP_013918288
			E	Acanthamoeba castellanii str. Neff	ACACA00643		L8HM94
			E	Procavia capensis	PROCA05580		ENSPCAG00000000076
			E	Loxodonta africana	LOXAF15051		G3SWH1
			E	Oryctolagus cuniculus	RABIT03071		ENSOCUG00000011307.2
			E	Dipodomys ordii	DIPOR19399		ENSDORG00000003460.2
			E	Fukomys damarensis	FUKDA20527		ENSFDAG00000005738.1
			E	Heterocephalus glaber	HETGA11488		G5AMU6
			E	Cavia aperea	CAVAP10227		ENSCAPG00000005733.1
			E	Cavia porcellus	CAVPO14024		H0V4U4
			E	Chinchilla lanigera	CHILA19470		A0A8C2UJT4
			E	Octodon degus	OCTDE06593		ENSODEG00000010884.1
			E	Jaculus jaculus	JACJA21432		A0A8C5JZN5
			E	Cricetulus griseus	CRIGR08544		A0A8C2LPZ3
			E	Mus musculus	MOUSE45508		GLTL5_MOUSE
			E	Nannospalax galili	NANGA05747		A0A8C6W2L4
			E	Ictidomys tridecemlineatus	ICTTR02551		ENSSTOG00000012361
			E	Cercocebus atys	CERAT24304		A0A2K5NBL9
			E	Macaca fascicularis	MACFA30735		ENSMFAG00000044831.1
			E	Macaca mulatta	MACMU32923		F7F8Q8
			E	Macaca nemestrina	MACNE21928		A0A2K6DBM1
			E	Mandrillus leucophaeus	MANLE22872		A0A2K6A8G3
			E	Papio anubis	PAPAN28737		A0A8I5NQ43
			E	Colobus angolensis palliatus	COLAP01860		A0A2K5K5W7
			E	Rhinopithecus bieti	RHIBE29928		A0A2K6MRL5

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