Pairwise Orthologs for RATNO24990

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO24990 (SYT6_RAT)

E Rattus norvegicus | Synaptotagmin-6 [Syt6]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Callorhinchus milii	CALMI33715		A0A4W3HUJ8
			E	Lepisosteus oculatus	LEPOC11498		W5MWV4
			E	Anguilla anguilla	ANGAN40057		XP_035237839
			E	Anabas testudineus	ANATE21278		ENSATEG00000024407.1
			E	Seriola dumerili	SERDU15637		A0A3B4TIZ7
			E	Echeneis naucrates	ECHNA01569		A0A665UPC2
			E	Cynoglossus semilaevis	CYNSE02286		A0A3P8WKW4
			E	Scophthalmus maximus	SCOMX03052		ENSSMAG00000019346.1
			E	Dicentrarchus labrax	DICLA31339		A0A8P4KEI2
			E	Gasterosteus aculeatus	GASAC11880		G3PB33
			E	Mola mola	MOLML05410		A0A3Q3XBI3
			E	Takifugu rubripes	TAKRU36656		A0A674P6F8
			E	Tetraodon nigroviridis	TETNG13895		H3D4E1
			E	Oryzias javanicus	ORYJA18990		ENSOJAG00000013430.1
			E	Oryzias latipes	ORYLA16147		ENSORLG00000016069
			E	Oryzias melastigma	ORYME06120		A0A3B3DSI3
			E	Nothobranchius furzeri	NOTFU03641		A0A9D2XW62
			E	Kryptolebias marmoratus	KRYMA12515		A0A3Q3EQ46
			E	Cyprinodon variegatus	CYPVA24242		A0A3Q2EIY3
			E	Gambusia affinis	GAMAF11987		ENSGAFG00000019941.1
			E	Poecilia formosa	POEFO16681		A0A096M092
			E	Poecilia reticulata	POERE30054		A0A3P9QCR4
			E	Xiphophorus maculatus	XIPMA16893		A0A3B5R0K7
			E	Salarias fasciatus	SALFA39273		A0A672HVT7
			E	Astatotilapia calliptera	ASTCA20608		A0A3P8QCF8

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