Pairwise Orthologs for RATNO23995

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO23995 (D4ABE3)

E Rattus norvegicus | [heparan sulfate]-glucosamine N-sulfotransferase [Ndst3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Esox lucius	ESOLU70711		A0A6Q2X6U1
			E	Ornithorhynchus anatinus	ORNAN03845		F6PSU7
			E	Tachyglossus aculeatus	TACAU13882		XP_038611043
			E	Procavia capensis	PROCA14487		ENSPCAG00000004448
			E	Loxodonta africana	LOXAF14260		G3TN38
			E	Echinops telfairi	ECHTE13331		ENSETEG00000006620
			E	Oryctolagus cuniculus	RABIT05126		ENSOCUG00000009952.3
			E	Fukomys damarensis	FUKDA09362		ENSFDAG00000021427.1
			E	Heterocephalus glaber	HETGA11101		G5C8R4
			E	Cavia aperea	CAVAP02989		ENSCAPG00000006021.1
			E	Cavia porcellus	CAVPO04513		H0V1T4
			E	Chinchilla lanigera	CHILA08273		A0A8C2YKV9
			E	Mus musculus	MOUSE36993		E9PZJ4
			E	Cercocebus atys	CERAT08751		A0A2K5NHZ7
			E	Chlorocebus sabaeus	CHLSB16624		A0A0D9QUV0
			E	Macaca fascicularis	MACFA34508		A0A2K5WFH6
			E	Macaca mulatta	MACMU37495		F7DZJ3
			E	Macaca nemestrina	MACNE03283		A0A2K6C628
			E	Mandrillus leucophaeus	MANLE12852		A0A2K5YXZ7
			E	Papio anubis	PAPAN26843		A0A096MX80
			E	Colobus angolensis palliatus	COLAP10231		A0A2K5I1H5
			E	Rhinopithecus bieti	RHIBE32014		A0A2K6L6G8
			E	Rhinopithecus roxellana	RHIRO17497		A0A2K6Q113
			E	Gorilla gorilla gorilla	GORGO30853		G3SKG0
			E	Homo sapiens	HUMAN77173		NDST3_HUMAN

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