Pairwise Orthologs for RATNO22155

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO22155 (A0A0G2K557)

E Rattus norvegicus | PHD finger protein 1 [Phf1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Latimeria chalumnae	LATCH10097		H3ABW6
			E	Tachyglossus aculeatus	TACAU32340		XP_038598112
			E	Procavia capensis	PROCA06823		ENSPCAG00000008534
			E	Loxodonta africana	LOXAF03054		G3SX20
			E	Echinops telfairi	ECHTE04389		ENSETEG00000001148
			E	Oryctolagus cuniculus	RABIT02325		G1T5X4
			E	Ochotona princeps	OCHPR11482		ENSOPRG00000001082
			E	Dipodomys ordii	DIPOR23020		ENSDORG00000003258.2
			E	Fukomys damarensis	FUKDA17413		ENSFDAG00000014623.1
			E	Cavia aperea	CAVAP06530		ENSCAPG00000017933.1
			E	Cavia porcellus	CAVPO08573		H0VD18
			E	Chinchilla lanigera	CHILA10153		A0A8C2VAQ7
			E	Octodon degus	OCTDE02085		ENSODEG00000017098.1
			E	Jaculus jaculus	JACJA00720		A0A8C5K0P4
			E	Cricetulus griseus	CRIGR21092		A0A8C2MNZ8
			E	Mus musculus	MOUSE21713		PHF1_MOUSE
			E	Nannospalax galili	NANGA06901		A0A8C6R764
			E	Ictidomys tridecemlineatus	ICTTR16487		ENSSTOG00000002459
			E	Chlorocebus sabaeus	CHLSB06421		A0A0D9RB57
			E	Macaca mulatta	MACMU34391		A0A1D5R364
			E	Mandrillus leucophaeus	MANLE00455		A0A2K5ZWS7
			E	Papio anubis	PAPAN33369		A0A096NHI6
			E	Gorilla gorilla gorilla	GORGO36435		G3QDE5
			E	Homo sapiens	HUMAN84328		PHF1_HUMAN
			E	Pongo abelii	PONAB31431		H2PIQ2

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