Pairwise Orthologs for RATNO15688

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO15688 (LRFN1_RAT)

E Rattus norvegicus | Leucine-rich repeat and fibronectin type III domai [Lrfn1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA09684		BL31304
			E	Lepisosteus oculatus	LEPOC07858		W5NBH4
			E	Anguilla anguilla	ANGAN41125		XP_035239709
			E	Anabas testudineus	ANATE19494		ENSATEG00000021828.1
			E	Echeneis naucrates	ECHNA06151		A0A665TRZ6
			E	Cynoglossus semilaevis	CYNSE23115		A0A3P8W963
			E	Mola mola	MOLML07561		A0A3Q4BH73
			E	Takifugu rubripes	TAKRU03731		A0A674N8R1
			E	Tetraodon nigroviridis	TETNG05646		H3DFJ0
			E	Oryzias javanicus	ORYJA09342		A0A3S2U848
			E	Oryzias latipes	ORYLA03272		H2LK20
			E	Oryzias melastigma	ORYME07150		A0A3B3BF31
			E	Nothobranchius furzeri	NOTFU10242		A0A1A8UDB9
			E	Kryptolebias marmoratus	KRYMA22826		A0A3Q2ZVY9
			E	Cyprinodon variegatus	CYPVA01413		A0A3Q2EGM6
			E	Gambusia affinis	GAMAF17640		ENSGAFG00000013181.1
			E	Poecilia formosa	POEFO07260		A0A087XHB7
			E	Poecilia reticulata	POERE05860		A0A3P9P1J1
			E	Xiphophorus maculatus	XIPMA12345		M4A4X4
			E	Salarias fasciatus	SALFA45702		A0A672FVD2
			E	Haplochromis burtoni	HAPBU16414		A0A3Q3C878
			E	Neolamprologus brichardi	NEOBR21605		A0A3Q4HU10
			E	Oreochromis aureus	OREAU20838		A0A668UTD3
			E	Oreochromis niloticus	ORENI15997		I3JYL8
			E	Amphilophus citrinellus	AMPCI16775		A0A3Q0RHS7

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