Pairwise Orthologs for RATNO01923

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RATNO01923 (Q9ERA7)

E Rattus norvegicus | Mesothelin [Msln]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Latimeria chalumnae	LATCH01949		H3A8S7
			E	Ornithorhynchus anatinus	ORNAN14844		A0A6I8P8L9
			E	Tachyglossus aculeatus	TACAU21831		XP_038618633
			E	Ochotona princeps	OCHPR01556		ENSOPRG00000008262
			E	Dipodomys ordii	DIPOR08274		ENSDORG00000009951.2
			E	Fukomys damarensis	FUKDA12577		A0A091DWW4
			E	Heterocephalus glaber	HETGA14495		ENSHGLG00100016186.1
			E	Cavia porcellus	CAVPO03154		H0UUP8
			E	Chinchilla lanigera	CHILA11555		A0A8C2W3S8
			E	Octodon degus	OCTDE05629		ENSODEG00000015072.1
			E	Jaculus jaculus	JACJA03109		A0A8C5P5N5
			E	Cricetulus griseus	CRIGR08828		ENSCGRG00000010022.1
			E	Mus musculus	MOUSE21077		MSLN_MOUSE
			E	Nannospalax galili	NANGA18999		A0A8C6R0P5
			E	Ictidomys tridecemlineatus	ICTTR12562		ENSSTOG00000021357
			E	Cercocebus atys	CERAT40827		A0A2K5NGJ2
			E	Chlorocebus sabaeus	CHLSB14269		A0A0D9RI80
			E	Macaca fascicularis	MACFA23952		ENSMFAG00000001868.1
			E	Macaca mulatta	MACMU27749		A0A5F7ZAB2
			E	Macaca nemestrina	MACNE42840		A0A2K6CDW6
			E	Mandrillus leucophaeus	MANLE22344		A0A2K5XIB7
			E	Colobus angolensis palliatus	COLAP11684		A0A2K5IIT2
			E	Gorilla gorilla gorilla	GORGO11090		G3RDL9
			E	Homo sapiens	HUMAN25565		MSLN_HUMAN
			E	Pan paniscus	PANPA14350		A0A2R9A6S2

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