Pairwise Orthologs for RABIT11222

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RABIT11222 (ENSOCUG00000004297.3)

E Oryctolagus cuniculus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL31771		A0A9J7M5T0
			E	Eptatretus burgeri	EPTBU14677		A0A8C4PZ13
			E	Scyliorhinus torazame	SCYTO07352		A0A401NS98
			E	Chiloscyllium punctatum	CHIPU06451		A0A401SCI6
			E	Callorhinchus milii	CALMI16074		A0A4W3HH54
			E	Lepisosteus oculatus	LEPOC03951		W5MP46
			E	Anguilla anguilla	ANGAN08352		XP_035261240
			E	Seriola dumerili	SERDU01005		A0A3B4UJM2
			E	Oreochromis niloticus	ORENI31616		A0A669DAL0
			E	Amphiprion percula	AMPPE12838		A0A3P8SQF5
			E	Latimeria chalumnae	LATCH11924		H3B2J4
			E	Ornithorhynchus anatinus	ORNAN15805		F6RQU7
			E	Tachyglossus aculeatus	TACAU22813		XP_038619167
			E	Procavia capensis	PROCA13355		ENSPCAG00000015173
			E	Loxodonta africana	LOXAF05450		G3UCM8
			E	Echinops telfairi	ECHTE07310		ENSETEG00000009922
			E	Dipodomys ordii	DIPOR07839		ENSDORG00000024446.1
			E	Heterocephalus glaber	HETGA05249		ENSHGLG00100010954.1
			E	Cavia porcellus	CAVPO03249		H0VR06
			E	Chinchilla lanigera	CHILA19605		A0A8C2VNQ5
			E	Octodon degus	OCTDE00039		ENSODEG00000013264.1
			E	Jaculus jaculus	JACJA22232		A0A8C5LAQ4
			E	Cricetulus griseus	CRIGR24123		ENSCGRG00000002913.1
			E	Mus musculus	MOUSE56411		OTOAN_MOUSE
			E	Rattus norvegicus	RATNO18446		D4A6R6

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