Pairwise Orthologs for RABIT04201

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene RABIT04201 (G1TEI7)

E Oryctolagus cuniculus | Platelet-activating factor receptor [PTAFR]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO14005		A0A401NIE5
			E	Chiloscyllium punctatum	CHIPU05243		A0A401S8Z5
			E	Callorhinchus milii	CALMI17946		A0A4W3J9L1
			E	Lepisosteus oculatus	LEPOC14553		W5NP24
			E	Anguilla anguilla	ANGAN04607		XP_035246361
			E	Seriola dumerili	SERDU00513		A0A3B4UUK8
			E	Echeneis naucrates	ECHNA40555		A0A665W874
			E	Cynoglossus semilaevis	CYNSE16497		A0A3P8UM78
			E	Dicentrarchus labrax	DICLA05197		A0A8P4G2I3
			E	Gasterosteus aculeatus	GASAC06488		G3P588
			E	Mola mola	MOLML08037		A0A3Q3WV23
			E	Tetraodon nigroviridis	TETNG01604		H3DIQ1
			E	Oryzias javanicus	ORYJA30555		ENSOJAG00000023231.1
			E	Oryzias latipes	ORYLA10230		ENSORLG00000012571
			E	Oryzias melastigma	ORYME09299		A0A3B3C8X1
			E	Nothobranchius furzeri	NOTFU25402		A0A8C6NLZ9
			E	Kryptolebias marmoratus	KRYMA01013		A0A3Q3FKA1
			E	Gambusia affinis	GAMAF08452		ENSGAFG00000002795.1
			E	Poecilia formosa	POEFO11022		A0A087XFQ7
			E	Poecilia reticulata	POERE20422		A0A3P9Q3I9
			E	Xiphophorus maculatus	XIPMA14717		M4AFP2
			E	Salarias fasciatus	SALFA11957		A0A672J633
			E	Amphiprion ocellaris	AMPOC06273		A0A3Q1BCV9
			E	Amphiprion percula	AMPPE23072		A0A3P8TNJ7
			E	Hippocampus comes	HIPCM08052		A0A3Q2XZ17

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