Pairwise Orthologs for HUMAN76596

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN76596 (ATOH1_HUMAN)

E Homo sapiens | Transcription factor ATOH1 [ATOH1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO11458		A0A401NRD5
			E	Chiloscyllium punctatum	CHIPU04661		A0A401S7G3
			E	Lepisosteus oculatus	LEPOC07514		W5NLZ8
			E	Anguilla anguilla	ANGAN37901		A0A9D3M4A0
			E	Anabas testudineus	ANATE12327		ENSATEG00000015582.1
			E	Seriola dumerili	SERDU18861		A0A3B4VJ86
			E	Echeneis naucrates	ECHNA21750		A0A665VSP1
			E	Dicentrarchus labrax	DICLA29445		XP_051277438
			E	Gasterosteus aculeatus	GASAC14243		G3NWL0
			E	Sparus aurata	SPAAU13071		A0A671UC33
			E	Takifugu rubripes	TAKRU29598		A0A674PL41
			E	Tetraodon nigroviridis	TETNG03217		H3DJN4
			E	Oryzias javanicus	ORYJA44262		A0A437CZQ1
			E	Oryzias latipes	ORYLA17478		ENSORLG00000004876
			E	Oryzias melastigma	ORYME11302		A0A3B3E212
			E	Nothobranchius furzeri	NOTFU27906		A0A9D2XEJ1
			E	Cyprinodon variegatus	CYPVA00913		A0A3Q2CTD4
			E	Gambusia affinis	GAMAF15568		ENSGAFG00000013546.1
			E	Poecilia formosa	POEFO04127		A0A087YMG1
			E	Poecilia reticulata	POERE33572		A0A3P9PZK0
			E	Xiphophorus maculatus	XIPMA04378		M4ALM7
			E	Salarias fasciatus	SALFA07794		A0A672J596
			E	Neolamprologus brichardi	NEOBR09530		A0A3Q4MQ24
			E	Oreochromis aureus	OREAU24956		A0A668RSZ7
			E	Amphilophus citrinellus	AMPCI26877		A0A3Q0SUF6

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