Pairwise Orthologs for HUMAN55256

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN55256 (ARI4B_HUMAN)

E Homo sapiens | AT-rich interactive domain-containing protein 4B [ARID4B]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Lacticaseibacillus paracasei (strain ATCC 334 / BCRC 17002 / CCUG 31169 / CIP 107868 / KCTC 3260 / NRRL B-441)	LACP300433		LSEI_0465
			B	Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)	RHOBA01125		WP_011121744
			E	Acanthamoeba castellanii str. Neff	ACACA03103		L8HD13
			E	Spizellomyces punctatus	SPIPN08478		SPPG_08935
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD01795		A0A0L0HRF9
			E	Eptatretus burgeri	EPTBU05692		A0A8C4WVD4
			E	Scyliorhinus torazame	SCYTO06396		A0A401PI62
			E	Chiloscyllium punctatum	CHIPU15046		A0A401T1Z8
			E	Callorhinchus milii	CALMI16481		A0A4W3IZJ9
			E	Lepisosteus oculatus	LEPOC05153		W5NG20
			E	Anabas testudineus	ANATE09184		A0A3Q1JZ31
			E	Seriola dumerili	SERDU12411		A0A3B4TD59
			E	Echeneis naucrates	ECHNA11216		A0A665WJD0
			E	Cynoglossus semilaevis	CYNSE05288		A0A3P8W3W5
			E	Scophthalmus maximus	SCOMX08366		ENSSMAG00000010430.1
			E	Dicentrarchus labrax	DICLA02634		A0A8C4IMS7
			E	Gasterosteus aculeatus	GASAC09799		G3NK22
			E	Sparus aurata	SPAAU10130		A0A671VKB8
			E	Mola mola	MOLML01471		A0A3Q3VIZ2
			E	Takifugu rubripes	TAKRU40643		H2S2Y6
			E	Tetraodon nigroviridis	TETNG06074		H3DGW8
			E	Oryzias javanicus	ORYJA46410		ENSOJAG00000020661.1
			E	Oryzias melastigma	ORYME08783		A0A3B3CJ83
			E	Nothobranchius furzeri	NOTFU04193		A0A1A8AX52
			E	Kryptolebias marmoratus	KRYMA16163		A0A3Q3AF57

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