Pairwise Orthologs for HUMAN54387

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN54387 (CDK18_HUMAN)

E Homo sapiens | Cyclin-dependent kinase 18 [CDK18]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Planctomycetes bacterium SRT547	UC10606542		UABAM_06624
			B	Planctomycetes bacterium NC_groundwater_288_Ag_S-0.65um_63_14	U08PL02944		HYU36_20750
			E	Rhizopus microsporus	RHIZD04820		A0A1X0S319
			E	Scyliorhinus torazame	SCYTO05283		A0A401P6D1
			E	Chiloscyllium punctatum	CHIPU19127		A0A401RRF4
			E	Callorhinchus milii	CALMI46029		A0A4W3HEA4
			E	Lepisosteus oculatus	LEPOC11640		W5N1Q5
			E	Anguilla anguilla	ANGAN45996		XP_035245087
			E	Anabas testudineus	ANATE35260		ENSATEG00000005425.1
			E	Seriola dumerili	SERDU07084		A0A3B4U597
			E	Echeneis naucrates	ECHNA05420		A0A665WWX1
			E	Cynoglossus semilaevis	CYNSE03855		A0A3P8WAF8
			E	Dicentrarchus labrax	DICLA21836		XP_051272444
			E	Gasterosteus aculeatus	GASAC04330		G3PA70
			E	Sparus aurata	SPAAU40220		A0A671VS42
			E	Mola mola	MOLML02308		A0A3Q4B5V5
			E	Takifugu rubripes	TAKRU21734		A0A674PCA9
			E	Tetraodon nigroviridis	TETNG02740		H3CPK1
			E	Oryzias javanicus	ORYJA03589		ENSOJAG00000017842.1
			E	Oryzias latipes	ORYLA14234		ENSORLG00000012176
			E	Oryzias melastigma	ORYME01329		A0A3B3B4S4
			E	Nothobranchius furzeri	NOTFU29649		LOC107395660
			E	Kryptolebias marmoratus	KRYMA27487		A0A3Q2ZRJ7
			E	Gambusia affinis	GAMAF00286		ENSGAFG00000006829.1
			E	Poecilia formosa	POEFO20178		A0A087X8K4

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