Pairwise Orthologs for PROCO03754

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PROCO03754 (A0A2K6G2R5)

E Propithecus coquereli | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltra [ST8SIA2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Emiliania huxleyi CCMP1516	EMIHU24101		R1E344
			E	Scyliorhinus torazame	SCYTO01123		A0A401P9N0
			E	Chiloscyllium punctatum	CHIPU12757		A0A401SVL2
			E	Lepisosteus oculatus	LEPOC12005		W5NAP6
			E	Anguilla anguilla	ANGAN51486		XP_035250909
			E	Anabas testudineus	ANATE22171		A0A3Q1HGD5
			E	Seriola dumerili	SERDU10624		A0A3B4UCD2
			E	Echeneis naucrates	ECHNA53670		A0A665UX82
			E	Scophthalmus maximus	SCOMX00844		ENSSMAG00000001692.1
			E	Dicentrarchus labrax	DICLA41733		A0A8P4G1A3
			E	Gasterosteus aculeatus	GASAC15633		G3P9E4
			E	Mola mola	MOLML15743		A0A3Q3WNI4
			E	Takifugu rubripes	TAKRU50837		A0A3B5KIA5
			E	Tetraodon nigroviridis	TETNG19665		H3DMP3
			E	Oryzias javanicus	ORYJA32826		A0A3S2N1S8
			E	Oryzias latipes	ORYLA14977		ENSORLG00000008368
			E	Oryzias melastigma	ORYME03817		A0A3B3BHS3
			E	Nothobranchius furzeri	NOTFU21062		A0A1A8U454
			E	Kryptolebias marmoratus	KRYMA03189		A0A3Q3GC59
			E	Cyprinodon variegatus	CYPVA10341		A0A3Q2FDZ5
			E	Gambusia affinis	GAMAF20515		ENSGAFG00000001871.1
			E	Poecilia formosa	POEFO14299		A0A087XMD5
			E	Poecilia reticulata	POERE28908		A0A3P9NJ59
			E	Xiphophorus maculatus	XIPMA23554		M3ZKP4
			E	Salarias fasciatus	SALFA28351		A0A672GXQ0

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