Pairwise Orthologs for PROCA13395

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PROCA13395 (ENSPCAG00000004204)

E Procavia capensis

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO03104		A0A401PLR6
			E	Chiloscyllium punctatum	CHIPU08440		A0A401SI17
			E	Callorhinchus milii	CALMI25893		A0A4W3II56
			E	Lepisosteus oculatus	LEPOC07149		W5MS63
			E	Gasterosteus aculeatus	GASAC14190		G3NU86
			E	Mola mola	MOLML23790		A0A3Q3VLQ5
			E	Oryzias melastigma	ORYME11386		A0A3B3DXY8
			E	Nothobranchius furzeri	NOTFU27970		A0A1A8B624
			E	Astatotilapia calliptera	ASTCA05336		A0A3P8PTY6
			E	Esox lucius	ESOLU43454		A0A3P8Y4E2
			E	Salmo salar	SALSA69727		ENSSSAG00000070313.2
			E	Astyanax mexicanus	ASTMX20773		A0A8T2L383
			E	Pygocentrus nattereri	PYGNA02141		A0A3B4DQQ0
			E	Electrophorus electricus	ELEEL22061		A0A4W4ERM3
			E	Ictalurus punctatus	ICTPU11912		ENSIPUG00000004762.1
			E	Danio rerio	DANRE21571		HABP4_DANRE
			E	Latimeria chalumnae	LATCH09377		H3AS90
			E	Loxodonta africana	LOXAF16884		G3TKW6
			E	Echinops telfairi	ECHTE07620		ENSETEG00000011475
			E	Oryctolagus cuniculus	RABIT00416		ENSOCUG00000023077.2
			E	Cavia aperea	CAVAP11574		ENSCAPG00000014437.1
			E	Cavia porcellus	CAVPO15824		H0UYN8
			E	Chinchilla lanigera	CHILA07194		A0A8C2YUM3
			E	Jaculus jaculus	JACJA08221		A0A8C5KQV8
			E	Mus musculus	MOUSE12265		E9QKB2

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