Pairwise Orthologs for PROCA00419

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PROCA00419 (ENSPCAG00000014458)

E Procavia capensis

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chrysemys picta bellii	CHRPI28919		A0A8C3H4Y4
			E	Chrysemys picta bellii	CHRPI23239		A0A8C3HAB3
			E	Sceloporus undulatus	SCEUN30580		XP_042331565
			E	Sceloporus undulatus	SCEUN30581		XP_042332462
			E	Oryctolagus cuniculus	RABIT01304	m:n	ENSOCUG00000023422.2
			E	Ochotona princeps	OCHPR00300	m:1	ENSOPRG00000004325
			E	Cavia aperea	CAVAP17228	m:1	ENSCAPG00000007621.1
			E	Cavia porcellus	CAVPO23571	m:1	H0VTC8
			E	Nannospalax galili	NANGA26461	m:1	A0A8C6QWW9
			E	Gorilla gorilla gorilla	GORGO01891	m:1	G3RRU9
			E	Homo sapiens	HUMAN05932	m:1	Q8NH19
			E	Pan paniscus	PANPA42566	m:1	A0A2R8ZXD3
			E	Pan troglodytes	PANTR02880	m:1	A0A2I3RXH1
			E	Nomascus leucogenys	NOMLE27957	m:1	G1SCA0
			E	Otolemur garnettii	OTOGA01293	m:1	H0XPG6
			E	Bos indicus x Bos taurus	BOBOX34276		A0A4W2CNT9
			E	Bos taurus	BOVIN07599		ENSBTAG00000015876.6
			E	Sus scrofa	PIGXX39122		ENSSSCG00000005795.3
			E	Canis lupus familiaris	CANLF05780		A0A8C0M524
			E	Vulpes vulpes	VULVU38399		ENSVVUG00000030396.1

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