Pairwise Orthologs for PONAB18333

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PONAB18333 (A0A8I5TF42)

E Pongo abelii | Apolipoprotein A-II [APOA2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU27178		XP_038624812
			E	Procavia capensis	PROCA08088		ENSPCAG00000013866
			E	Loxodonta africana	LOXAF09574		G3U2E4
			E	Oryctolagus cuniculus	RABIT03176		G1T5K3
			E	Dipodomys ordii	DIPOR18482		A0A1S3GDE2
			E	Fukomys damarensis	FUKDA18971		A0A091CMA7
			E	Heterocephalus glaber	HETGA06343		APOA2_HETGA
			E	Cavia porcellus	CAVPO17892		H0VT38
			E	Chinchilla lanigera	CHILA16684		A0A8C2W2U6
			E	Octodon degus	OCTDE18127		A0A6P3FKZ3
			E	Jaculus jaculus	JACJA23389		A0A8C5L9F5
			E	Cricetulus griseus	CRIGR15979		G3HTY7
			E	Mus musculus	MOUSE30158		APOA2_MOUSE
			E	Rattus norvegicus	RATNO07362		APOA2_RAT
			E	Nannospalax galili	NANGA24946		A0A8C6RT74
			E	Ictidomys tridecemlineatus	ICTTR08066		I3N901
			E	Cercocebus atys	CERAT36952		ENSCATG00000039963.1
			E	Chlorocebus sabaeus	CHLSB08208		APOA2_CHLSB
			E	Macaca fascicularis	MACFA20716		P18656
			E	Macaca mulatta	MACMU24205		A0A8J8XNR3
			E	Macaca nemestrina	MACNE23689		ENSMNEG00000000206.1
			E	Mandrillus leucophaeus	MANLE39158		A0A2K5YTJ4
			E	Papio anubis	PAPAN20093		A0A096NQ04
			E	Colobus angolensis palliatus	COLAP37644		APOA2_COLAN
			E	Rhinopithecus bieti	RHIBE39728		A0A2K6L0I1

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