Pairwise Orthologs for PODMU04073

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PODMU04073 (A0A670HPM7)

E Podarcis muralis | Glutamine synthetase [GLUL]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Candidatus Latescibacteria bacterium B68_G9	UC12900820		DRP94_04245
			B	Candidatus Omnitrophica bacterium B17_G2	UC13000612		DRP75_03285
			B	Jannaschia sp. (strain CCS1)	JANSC01442		Jann_1446
			E	Branchiostoma lanceolatum	BRALA22242		A0A8K0AA19
			E	Petromyzon marinus	PETMA00211		S4RTF2
			E	Eptatretus burgeri	EPTBU10494		ENSEBUG00000001920.1
			E	Scyliorhinus torazame	SCYTO18186		A0A401PVW2
			E	Chiloscyllium punctatum	CHIPU20726		A0A401RKY3
			E	Callorhinchus milii	CALMI30593		A0A4W3GHT3
			E	Lepisosteus oculatus	LEPOC01372		W5MAD8
			E	Anguilla anguilla	ANGAN22419		A0A9D3MGP7
			E	Seriola dumerili	SERDU28445		A0A3B4TZR4
			E	Echeneis naucrates	ECHNA32342		A0A665T8R3
			E	Cynoglossus semilaevis	CYNSE18746		A0A3P8WRA6
			E	Gasterosteus aculeatus	GASAC12180		G3NIV9
			E	Mola mola	MOLML19556		A0A3Q3X232
			E	Tetraodon nigroviridis	TETNG05430		H3DCP9
			E	Oryzias javanicus	ORYJA28618		A0A3S2P1I3
			E	Oryzias latipes	ORYLA06964		ENSORLG00000016687
			E	Oryzias melastigma	ORYME25422		A0A3B3BBF3
			E	Kryptolebias marmoratus	KRYMA14866		A0A3Q3AJ49
			E	Salarias fasciatus	SALFA34299		A0A672ID23
			E	Amphiprion percula	AMPPE00899		A0A3P8SBJ6
			E	Hippocampus comes	HIPCM03724		A0A3Q2XEV3
			E	Astyanax mexicanus	ASTMX10326		A0A8B9LR79

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