Pairwise Orthologs for PHYRM02381

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PHYRM02381 (H3GGH3)

E Phytophthora ramorum | Uncharacterized protein

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA14550		L8GEN1
			E	Thecamonas trahens ATCC 50062	THETB00820		A0A0L0DDS0
			E	Emiliania huxleyi CCMP1516	EMIHU29203		R1D327
			E	Monosiga brevicollis	MONBE09081		A9VCT8
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO302736		A0A0D2X3C5
			E	Bigelowiella natans (strain CCMP2755)	BIGNC12109		JGI_V11_89008
			E	Thalassiosira oceanica	THAOC04886		K0TQ31
			E	Thalassiosira pseudonana CCMP1335	THAPS05009		B8BVA1
			E	Aureococcus anophagefferens	AURAN02126		F0XXL2
			E	Phytophthora infestans (strain T30-4)	PHYIT03863		A0A833SDY1
			E	Phytophthora nicotianae	PHYNI09622		AM587_10007986
			E	Phytophthora parasitica	PHYPR13519		W2L715
			E	Phytophthora parasitica (strain INRA-310)	PHYPN15492		W2L715
			E	Phytophthora sojae (strain P6497)	PHYSP06675		G4YYM9
			E	Plasmopara halstedii	PLAHL06570		A0A0P1B380
			E	Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144)	GLOUD09991		K3WYH1
			E	Ostreococcus tauri	OSTTA05546		Q00XH6
			E	Ostreococcus lucimarinus (strain CCE9901)	OSTLU06180		A4S640
			E	Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709)	MICCC02705		C1E5M9
			E	Chlamydomonas reinhardtii	CHLRE08834		A0A2K3CQQ5
			E	Chlorella variabilis	CHLVA05056		E1ZG96
			E	Physcomitrium patens	PHYPA26890		A9RTT5
			E	Marchantia polymorpha	MARPO21667		A0A2R6WL91
			E	Ginkgo biloba	GINBI19361		evm.TU.chr6.994
			E	Picea glauca	PICGL18244		PGL00018755

Showing 1 to 25 of 25 rows rows per page