Pairwise Orthologs for PHACI33139

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PHACI33139 (ENSPCIG00000025452.1)

E Phascolarctos cinereus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anabas testudineus	ANATE19370		ENSATEG00000017526.1
			E	Dicentrarchus labrax	DICLA07824		XP_051252474
			E	Tetraodon nigroviridis	TETNG05604		H3CQH0
			E	Gambusia affinis	GAMAF31644		ENSGAFG00000012542.1
			E	Amphiprion percula	AMPPE30577		A0A3P8RSH9
			E	Gadus morhua	GADMO17084		A0A8C4ZL96
			E	Salmo trutta	SALTR97882		A0A673WTB9
			E	Electrophorus electricus	ELEEL48446		A0A4W4GJ94
			E	Ornithorhynchus anatinus	ORNAN00890		F6R6S4
			E	Loxodonta africana	LOXAF18329		G3UD57
			E	Oryctolagus cuniculus	RABIT15749		ENSOCUG00000022413.1
			E	Cavia aperea	CAVAP13043		ENSCAPG00000012820.1
			E	Octodon degus	OCTDE26149		ENSODEG00000004032.1
			E	Nannospalax galili	NANGA20388		A0A8C6RZ06
			E	Propithecus coquereli	PROCO30912		A0A2K6FXA8
			E	Otolemur garnettii	OTOGA07498		H0XQL1
			E	Equus asinus asinus	EQUAS23979		A0A8C4MP82
			E	Ceratotherium simum simum	CERSS27597		XP_004439308
			E	Sarcophilus harrisii	SARHA04001		ENSSHAG00000006792
			E	Monodelphis domestica	MONDO24755		F7FK66
			E	Vombatus ursinus	VOMUR28656		A0A4X2LAI7
			E	Thamnophis elegans	THAEL29980		XP_032092359
			E	Anguilla anguilla	ANGAN42007		XP_035240786
			E	Anguilla anguilla	ANGAN42014		XP_035240783
			E	Seriola dumerili	SERDU31740		A0A3B4VQP1

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