Pairwise Orthologs for PHACI05154

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PHACI05154 (ENSPCIG00000006358.1)

E Phascolarctos cinereus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO05202		A0A401P4Y3
			E	Callorhinchus milii	CALMI36434		A0A4W3IQ74
			E	Lepisosteus oculatus	LEPOC12210		W5LZZ9
			E	Anguilla anguilla	ANGAN25449		XP_035281430
			E	Anabas testudineus	ANATE34110		A0A3Q1IY78
			E	Seriola dumerili	SERDU25072		ENSSDUG00000021635.1
			E	Cynoglossus semilaevis	CYNSE17243		A0A3P8WEW4
			E	Dicentrarchus labrax	DICLA35442		A0A8C4EER6
			E	Mola mola	MOLML22297		A0A3Q3X936
			E	Tetraodon nigroviridis	TETNG18157		H3CEM5
			E	Oryzias javanicus	ORYJA47686		A0A437CE57
			E	Oryzias latipes	ORYLA07395		ENSORLG00000005915
			E	Oryzias melastigma	ORYME21020		A0A3B3DAT8
			E	Nothobranchius furzeri	NOTFU29059		A0A8C6PFZ3
			E	Kryptolebias marmoratus	KRYMA18759		A0A3Q2ZXY3
			E	Gambusia affinis	GAMAF19609		ENSGAFG00000014903.1
			E	Poecilia formosa	POEFO19060		A0A087YQ90
			E	Poecilia reticulata	POERE13703		A0A3P9MX01
			E	Xiphophorus maculatus	XIPMA06556		A0A3B5QSE8
			E	Astatotilapia calliptera	ASTCA27468		A0A3P8QKL1
			E	Haplochromis burtoni	HAPBU12783		A0A3Q2VZY1
			E	Oreochromis aureus	OREAU26001		A0A668RAU7
			E	Oreochromis niloticus	ORENI50121		A0A669DCP8
			E	Amphiprion ocellaris	AMPOC22289		A0A3Q1CPW0
			E	Amphiprion percula	AMPPE11873		A0A3P8TTZ8

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