Pairwise Orthologs for PAPMA12491

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPMA12491 (XP_014371683)

E Papilio machaon

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Bombyx mori	BOMMO11117		A0A8R1WGV9
			E	Helicoverpa armigera	HELAM27228		LOC110381860
			E	Danaus plexippus	DANPL04223		EHJ70562
			E	Melitaea cinxia	MELCN02132		MCINX012036
			E	Vanessa tameamea	VANTA03885		A0A8B8HJF9
			E	Dendroctonus ponderosae	DENPD05942		N6TBL5
			E	Dufourea novaeangliae	DUFNO03989		LOC107190343
			E	Apis mellifera	APIME02418		GB52087
			E	Ooceraea biroi	OOCBI05643		A0A026X284
			E	Harpegnathos saltator	HARSA09811		E2BXK7
			E	Trichogramma pretiosum	TRIPJ08964		XP_014238297
			E	Diaphorina citri	DIACI01201		LOC103514775
			E	Pediculus humanus subsp. corporis	PEDHC05180		E0VSW5
			E	Heliconius melpomene	HELME07432		HMEL013891
			E	Heliconius melpomene	HELME08197		HMEL014878
			E	Camponotus floridanus	CAMFO13153		E2AWD8
			E	Camponotus floridanus	CAMFO13154		E2AWD9
			E	Nasonia vitripennis	NASVI01357		NV17341
			E	Nasonia vitripennis	NASVI01356		NV17340
			E	Nasonia vitripennis	NASVI01358		A0A7M7G2F6
			E	Rhodnius prolixus	RHOPR13197		T1H885
			E	Rhodnius prolixus	RHOPR14264		T1HHV9
			E	Acyrthosiphon pisum	ACYPI11682		A0A8R2D6R2
			E	Acyrthosiphon pisum	ACYPI03592		ACYPI001657
			E	Aristolochia fimbriata	ARIFI01764		H6P81_001764

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