Pairwise Orthologs for PAPAN27976

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPAN27976 (A0A096MLM5)

E Papio anubis | Toll-like receptor 1 [TLR1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL18352		A0A9J7LGL1
			E	Procavia capensis	PROCA03076		ENSPCAG00000005314
			E	Loxodonta africana	LOXAF13380		G3T217
			E	Oryctolagus cuniculus	RABIT08003		G1TIU2
			E	Fukomys damarensis	FUKDA10980		ENSFDAG00000018555.1
			E	Heterocephalus glaber	HETGA03978		A0A0P6J3B0
			E	Cavia aperea	CAVAP08389		ENSCAPG00000006234.1
			E	Cavia porcellus	CAVPO11141		H0VKX3
			E	Chinchilla lanigera	CHILA11114		A0A8C2W6B2
			E	Jaculus jaculus	JACJA10076		A0A8C5LAD8
			E	Cricetulus griseus	CRIGR26618		ENSCGRG00000014123.1
			E	Mus musculus	MOUSE45974		TLR1_MOUSE
			E	Rattus norvegicus	RATNO08425		E9PTL5
			E	Nannospalax galili	NANGA12951		A0A8C6WCY1
			E	Ictidomys tridecemlineatus	ICTTR02095		ENSSTOG00000021581
			E	Cercocebus atys	CERAT21381		A0A2K5KYW7
			E	Chlorocebus sabaeus	CHLSB12914		A0A0D9SE99
			E	Macaca fascicularis	MACFA33618		ENSMFAG00000029809.1
			E	Macaca mulatta	MACMU35923		F7AIC3
			E	Macaca nemestrina	MACNE04450		A0A2K6AP32
			E	Mandrillus leucophaeus	MANLE20341		A0A2K5XTY9
			E	Colobus angolensis palliatus	COLAP06681		A0A2K5HHD2
			E	Rhinopithecus bieti	RHIBE15647		A0A2K6LFC0
			E	Homo sapiens	HUMAN75227		TLR1_HUMAN
			E	Pan paniscus	PANPA30048		A0A2R8ZHB2

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