Pairwise Orthologs for PAPAN09394

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPAN09394 (A0A2I3LW17)

E Papio anubis | Lipin 1 [LPIN1]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform PAPAN09390.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP05291		D3AXC9
			E	Cavenderia fasciculata (strain SH3)	CAVFA09170		F4Q1P4
			E	Leptomonas pyrrhocoris	LEPPY02525		A0A0M9G6W4
			E	Grifola frondosa	GRIFR09364		A0A1C7LZB4
			E	Coprinopsis cinerea	COPCI14589		fgeneshDR_te_pg.Chr_
			E	Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)	COPC701069		A8NYN2
			E	Branchiostoma lanceolatum	BRALA15242		BL15265
			E	Callorhinchus milii	CALMI21550		A0A4W3IQ88
			E	Anguilla anguilla	ANGAN23596		XP_035278427
			E	Anabas testudineus	ANATE31342		ENSATEG00000003757.1
			E	Seriola dumerili	SERDU01668		A0A3B4UFU3
			E	Echeneis naucrates	ECHNA30772		A0A665V298
			E	Cynoglossus semilaevis	CYNSE26751		A0A3P8UL31
			E	Scophthalmus maximus	SCOMX17369		ENSSMAG00000009604.1
			E	Dicentrarchus labrax	DICLA16959		A0A8C4EU60
			E	Gasterosteus aculeatus	GASAC07564		G3PJI9
			E	Sparus aurata	SPAAU62280		A0A671WTV6
			E	Mola mola	MOLML14133		A0A3Q3XCG9
			E	Takifugu rubripes	TAKRU14012		A0A674ML71
			E	Tetraodon nigroviridis	TETNG04697		H3DFV5
			E	Oryzias javanicus	ORYJA01375		A0A3S2PMV8
			E	Oryzias latipes	ORYLA11747		ENSORLG00000016787
			E	Oryzias melastigma	ORYME16053		A0A3B3CEM9
			E	Nothobranchius furzeri	NOTFU07546		A0A1A8UHS5
			E	Kryptolebias marmoratus	KRYMA24436		A0A3Q3B8Q0

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