Pairwise Orthologs for PAPAN00818

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PAPAN00818 (A0A8I5NBF0)

E Papio anubis | G-protein coupled receptors family 1 profile domai

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cavia aperea	CAVAP07491		ENSCAPG00000012689.1
			E	Chlorocebus sabaeus	CHLSB01124		A0A0D9S979
			E	Macaca mulatta	MACMU10950		A0A5F7ZP02
			E	Macaca nemestrina	MACNE14680		A0A2K6AXU8
			E	Rhinopithecus bieti	RHIBE43662		A0A2K6KX55
			E	Gorilla gorilla gorilla	GORGO01996		G3RV74
			E	Homo sapiens	HUMAN09983		O10G8_HUMAN
			E	Pan paniscus	PANPA08211		A0A2R8ZTU5
			E	Pongo abelii	PONAB03806		A0A2J8X058
			E	Nomascus leucogenys	NOMLE09865		A0A2I3GCS8
			E	Vulpes vulpes	VULVU12730		A0A3Q7SEK8
			E	Ursus americanus	URSAM31703		A0A452QLR1
			E	Suricata suricatta	SURSU36965		A0A673UT82
			E	Choloepus hoffmanni	CHOHO00518		ENSCHOG00000001823
			E	Sphenodon punctatus	SPHPU06019		A0A8D0GRU4
			E	Python bivittatus	PYTBI25120		A0A9F2WJD8
			E	Loxodonta africana	LOXAF06155		G3U4H5
			E	Loxodonta africana	LOXAF06156		G3UEE8
			E	Loxodonta africana	LOXAF06158		G3UDU8
			E	Loxodonta africana	LOXAF06159		G3SVU1
			E	Oryctolagus cuniculus	RABIT00512		ENSOCUG00000023133.1
			E	Oryctolagus cuniculus	RABIT00545		G1TVD8
			E	Heterocephalus glaber	HETGA21417		G5C595
			E	Heterocephalus glaber	HETGA21418		G5C596
			E	Heterocephalus glaber	HETGA21419		G5C597

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