Pairwise Orthologs for PANTR47487

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR47487 (A0A2I3RPE2)

E Pan troglodytes | P-type domain-containing protein [MGAM2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chiloscyllium punctatum	CHIPU07334		A0A401SF22
			E	Ornithorhynchus anatinus	ORNAN15830		A0A6I8NRT2
			E	Oryctolagus cuniculus	RABIT15597		ENSOCUG00000000872.3
			E	Fukomys damarensis	FUKDA20301		ENSFDAG00000016321.1
			E	Heterocephalus glaber	HETGA27064		ENSHGLG00100007216.1
			E	Cavia porcellus	CAVPO06413		H0VFQ5
			E	Mus musculus	MOUSE50711		A0A571BDS5
			E	Ictidomys tridecemlineatus	ICTTR00506		ENSSTOG00000028880
			E	Cercocebus atys	CERAT30774		A0A2K5LWI9
			E	Macaca fascicularis	MACFA30529		ENSMFAG00000040766.1
			E	Macaca mulatta	MACMU31569		F7G370
			E	Macaca nemestrina	MACNE20611		A0A2K6DID7
			E	Mandrillus leucophaeus	MANLE39193		A0A2K5Z9C6
			E	Colobus angolensis palliatus	COLAP01680		A0A2K5I9Y7
			E	Rhinopithecus bieti	RHIBE22059		A0A2K6KIL2
			E	Rhinopithecus roxellana	RHIRO42798		A0A2K6PEP5
			E	Gorilla gorilla gorilla	GORGO39390		G3R4M6
			E	Homo sapiens	HUMAN91699		MGAL_HUMAN
			E	Pan paniscus	PANPA37374		A0A2R9B3A5
			E	Pongo abelii	PONAB33010		H2PNR5
			E	Nomascus leucogenys	NOMLE06279		G1QQE1
			E	Aotus nancymaae	AOTNA22213		A0A2K5DJD8
			E	Callithrix jacchus	CALJA43486		F6ZH08
			E	Cebus imitator	CEBIM33912		A0A2K5PEH4
			E	Capra hircus	CAPHI23239		A0A452ESN0

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