Pairwise Orthologs for PANTR43093

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR43093 (A0A6D2WZV4)

E Pan troglodytes | DPYS isoform 2 | Dihydropyrimidinase [DPYS]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Mycetohabitans rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454)	MYCRK03130		RBRH_00600
			E	Acanthamoeba castellanii str. Neff	ACACA08129		L8GW65
			E	Cavenderia fasciculata (strain SH3)	CAVFA07983		F4PJT1
			E	Dictyostelium discoideum	DICDI00998		DPYS_DICDI
			E	Dictyostelium purpureum	DICPU08375		F0ZV30
			E	Tieghemostelium lacteum	TIELA09631		A0A151Z489
			E	Bodo saltans	BODSA03983		A0A0S4JD29
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO300205		A0A0D2U060
			E	Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136)	VERA102874		C9SDR2
			E	Hypocrea jecorina	HYPJE07992		estExt_fgenesh5_pg.C
			E	Trichoderma harzianum	TRIHA00933		A0A0G0A3V5
			E	Fusarium culmorum	FUSCU10295		A0A2T4GYW2
			E	Magnaporthe grisea	MAGGR06977		MGG_10412
			E	Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)	MAGO710509		A0A4P7NPM9
			E	Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)	PICGU02349		A5DGE8
			E	Creolimax fragrantissima	CREFR01166		CFRG1166
			E	Branchiostoma floridae	BRAFL36806		A0A9J7HIS4
			E	Eptatretus burgeri	EPTBU25359		ENSEBUG00000000516.1
			E	Scyliorhinus torazame	SCYTO06835		A0A401NIR1
			E	Chiloscyllium punctatum	CHIPU09658		A0A401SLK2
			E	Callorhinchus milii	CALMI31028		V9KMF6
			E	Lepisosteus oculatus	LEPOC02594		W5MT26
			E	Anguilla anguilla	ANGAN02295		XP_035288770
			E	Anabas testudineus	ANATE08723		ENSATEG00000024762.1
			E	Seriola dumerili	SERDU09688		A0A3B4U0J3

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