Pairwise Orthologs for PANTR41207

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR41207 (H2QV94)

E Pan troglodytes | Protein phosphatase 1 regulatory subunit 3A [PPP1R3A]

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Ornithorhynchus anatinus	ORNAN01670		F7GD98
			E	Tachyglossus aculeatus	TACAU11290		XP_038608827
			E	Procavia capensis	PROCA06000		ENSPCAG00000016777
			E	Loxodonta africana	LOXAF17809		G3T3E1
			E	Echinops telfairi	ECHTE06744		ENSETEG00000006264
			E	Oryctolagus cuniculus	RABIT11506		PPR3A_RABIT
			E	Ochotona princeps	OCHPR07568		ENSOPRG00000010665
			E	Dipodomys ordii	DIPOR08912		ENSDORG00000023629.1
			E	Fukomys damarensis	FUKDA11056		ENSFDAG00000016552.1
			E	Heterocephalus glaber	HETGA02364		A0A0P6K7V3
			E	Cavia aperea	CAVAP04533		ENSCAPG00000013719.1
			E	Cavia porcellus	CAVPO06289		H0VVS1
			E	Chinchilla lanigera	CHILA09081		A0A8C2UXR5
			E	Octodon degus	OCTDE19859		ENSODEG00000013488.1
			E	Jaculus jaculus	JACJA09986		A0A8C5KS50
			E	Cricetulus griseus	CRIGR02136		A0A061IIM0
			E	Mus musculus	MOUSE48650		PPR3A_MOUSE
			E	Rattus norvegicus	RATNO30270		D3ZM60
			E	Nannospalax galili	NANGA19279		A0A8C6R1M7
			E	Ictidomys tridecemlineatus	ICTTR08136		I3MTW6
			E	Cercocebus atys	CERAT13668		A0A2K5KZ28
			E	Chlorocebus sabaeus	CHLSB09897		A0A0D9RFB2
			E	Macaca fascicularis	MACFA30170		ENSMFAG00000044966.1
			E	Macaca mulatta	MACMU33151		F7FMP7
			E	Macaca nemestrina	MACNE00001		A0A2K6CIR6

Showing 1 to 25 of 25 rows rows per page