Pairwise Orthologs for PANTR31496

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR31496 (A0A2I3RZP9)

E Pan troglodytes | Ataxin 7 [ATXN7]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO08176		A0A401P6H0
			E	Chiloscyllium punctatum	CHIPU00303		A0A401RUW9
			E	Callorhinchus milii	CALMI18628		A0A4W3H7P9
			E	Lepisosteus oculatus	LEPOC13817		W5MW94
			E	Anabas testudineus	ANATE03020		A0A3Q1J114
			E	Seriola dumerili	SERDU07323		A0A3B4VJG3
			E	Echeneis naucrates	ECHNA04102		A0A665U9B7
			E	Cynoglossus semilaevis	CYNSE03478		A0A3P8V2K7
			E	Scophthalmus maximus	SCOMX28023		ENSSMAG00000010499.1
			E	Dicentrarchus labrax	DICLA22171		A0A8C4I8F3
			E	Gasterosteus aculeatus	GASAC04207		G3P3M4
			E	Sparus aurata	SPAAU39996		A0A671UMH4
			E	Mola mola	MOLML02475		A0A3Q4AAH4
			E	Takifugu rubripes	TAKRU21548		H2TGI7
			E	Tetraodon nigroviridis	TETNG02126		H3D0N9
			E	Oryzias javanicus	ORYJA02147		ENSOJAG00000004116.1
			E	Oryzias latipes	ORYLA14071		ENSORLG00000008174
			E	Oryzias melastigma	ORYME00969		A0A3B3DCB5
			E	Nothobranchius furzeri	NOTFU16873		atxn7
			E	Kryptolebias marmoratus	KRYMA20183		A0A3Q3FIM2
			E	Cyprinodon variegatus	CYPVA31116		A0A3Q2DWQ8
			E	Gambusia affinis	GAMAF01207		ENSGAFG00000020500.1
			E	Poecilia formosa	POEFO17311		A0A087XWM6
			E	Poecilia reticulata	POERE27116		A0A3P9Q0N5
			E	Xiphophorus maculatus	XIPMA17755		A0A3B5R318

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