Pairwise Orthologs for PANTR28294

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR28294 (A0A2I3REA1)

E Pan troglodytes | Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu [MGAT4A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO306129		A0A0D2UDV0
			E	Petromyzon marinus	PETMA02808		S4RZQ8
			E	Scyliorhinus torazame	SCYTO05569		A0A401PAT3
			E	Chiloscyllium punctatum	CHIPU06141		A0A401SBN5
			E	Callorhinchus milii	CALMI12294		A0A4W3JL85
			E	Lepisosteus oculatus	LEPOC05471		W5M098
			E	Anguilla anguilla	ANGAN50641		A0A9D3LV54
			E	Anabas testudineus	ANATE23858		ENSATEG00000009056.1
			E	Seriola dumerili	SERDU03062		A0A3B4TRZ2
			E	Echeneis naucrates	ECHNA13559		A0A665WVX9
			E	Cynoglossus semilaevis	CYNSE10695		A0A3P8V0N8
			E	Scophthalmus maximus	SCOMX07155		A0A2U9CAV6
			E	Dicentrarchus labrax	DICLA13009		XP_051261036
			E	Gasterosteus aculeatus	GASAC10602		G3NEU6
			E	Sparus aurata	SPAAU28893		A0A671XPH1
			E	Mola mola	MOLML04781		A0A3Q3XNM5
			E	Takifugu rubripes	TAKRU24205		A0A3B5KGU5
			E	Tetraodon nigroviridis	TETNG08398		H3D8N8
			E	Oryzias javanicus	ORYJA40426		A0A437C6V7
			E	Oryzias latipes	ORYLA09556		ENSORLG00000012322
			E	Oryzias melastigma	ORYME14238		A0A3B3DEV8
			E	Nothobranchius furzeri	NOTFU22411		A0A1A8AG62
			E	Kryptolebias marmoratus	KRYMA06297		A0A3Q2ZDL7
			E	Cyprinodon variegatus	CYPVA25667		A0A3Q2EBZ4
			E	Gambusia affinis	GAMAF06114		ENSGAFG00000021238.1

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