Pairwise Orthologs for PANTR24605

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANTR24605 (OFUT1_PANTR)

E Pan troglodytes | GDP-fucose protein O-fucosyltransferase 1 [POFUT1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Monosiga brevicollis	MONBE04270		A9V0W7
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR502593		F2U2N7
			E	Creolimax fragrantissima	CREFR03454		CFRG3454
			E	Branchiostoma floridae	BRAFL05599		A0A9J7KP78
			E	Branchiostoma lanceolatum	BRALA17849		BL31423
			E	Eptatretus burgeri	EPTBU00184		A0A8C4QZC0
			E	Lepisosteus oculatus	LEPOC06239		W5MF76
			E	Anguilla anguilla	ANGAN39049		A0A9D3LYN1
			E	Anabas testudineus	ANATE19925		A0A3Q1GWQ4
			E	Seriola dumerili	SERDU27986		A0A3B4UP91
			E	Echeneis naucrates	ECHNA01766		A0A665UYM1
			E	Cynoglossus semilaevis	CYNSE01604		A0A3P8V013
			E	Scophthalmus maximus	SCOMX01661		A0A2U9BYZ4
			E	Dicentrarchus labrax	DICLA33357		A0A8C4E3N5
			E	Gasterosteus aculeatus	GASAC11283		G3NHQ2
			E	Sparus aurata	SPAAU50991		A0A671U6E0
			E	Mola mola	MOLML16943		A0A3Q3X4S7
			E	Tetraodon nigroviridis	TETNG17671		H3CBQ3
			E	Oryzias javanicus	ORYJA18279		A0A437D683
			E	Oryzias latipes	ORYLA15495		H2LAH6
			E	Oryzias melastigma	ORYME04909		A0A3B3BVZ7
			E	Nothobranchius furzeri	NOTFU30624		A0A9D3BKB4
			E	Kryptolebias marmoratus	KRYMA27123		A0A3Q3ASV4
			E	Cyprinodon variegatus	CYPVA31335		A0A3Q2DNQ3
			E	Gambusia affinis	GAMAF26640		A0A315WVY8

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