Pairwise Orthologs for PANPA27762

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANPA27762 (A0A2R8ZWT5)

E Pan paniscus | Zinc finger protein 589

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cercocebus atys	CERAT32261	1:1	A0A2K5MEV1
			E	Macaca fascicularis	MACFA27045	1:1	ENSMFAG00000001588.1
			E	Mandrillus leucophaeus	MANLE07368	1:1	A0A2K5XXM0
			E	Papio anubis	PAPAN25005	1:1	A0A8I5MVM3
			E	Gorilla gorilla gorilla	GORGO29939	1:1	G3QTC2
			E	Homo sapiens	HUMAN69778	1:1	ZN589_HUMAN
			E	Pan troglodytes	PANTR31032	1:1	A0A2J8PA55
			E	Pongo abelii	PONAB26335	1:1	A0A6D2X9E8
			E	Nomascus leucogenys	NOMLE29016	1:1	G1R3M7
			E	Propithecus coquereli	PROCO00202	1:1	A0A2K6GTM4
			E	Vicugna pacos	VICPA08630		ENSVPAG00000007383
			E	Tursiops truncatus	TURTR15453		ENSTTRG00000017317
			E	Ceratotherium simum simum	CERSS02275		XP_014643933
			E	Choloepus hoffmanni	CHOHO01068	1:1	ENSCHOG00000005730
			E	Drosophila suzukii	DROSZ06362		LOC108007382
			E	Procavia capensis	PROCA00228	1:1	ENSPCAG00000009799
			E	Tachyglossus aculeatus	TACAU28190		XP_038625452

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