Pairwise Orthologs for PANPA24964

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANPA24964 (A0A2R9CHI6)

E Pan paniscus | glutamine--fructose-6-phosphate transaminase (isom [GFPT1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA05133		S4RVF7
			E	Eptatretus burgeri	EPTBU20593		A0A8C4QQF3
			E	Scyliorhinus torazame	SCYTO01610		A0A401PEQ2
			E	Chiloscyllium punctatum	CHIPU01483		A0A401RY87
			E	Callorhinchus milii	CALMI43365		A0A4W3HWP2
			E	Lepisosteus oculatus	LEPOC00163		W5NCS5
			E	Anguilla anguilla	ANGAN36121		XP_035234479
			E	Anabas testudineus	ANATE11922		ENSATEG00000000048.1
			E	Seriola dumerili	SERDU06439		A0A3B4VBD4
			E	Echeneis naucrates	ECHNA22010		A0A665W324
			E	Cynoglossus semilaevis	CYNSE32714		A0A3P8WAK1
			E	Scophthalmus maximus	SCOMX32497		ENSSMAG00000006736.1
			E	Dicentrarchus labrax	DICLA29177		XP_051277456
			E	Gasterosteus aculeatus	GASAC14520		G3PAA3
			E	Sparus aurata	SPAAU13257		A0A671UHW3
			E	Mola mola	MOLML25335		A0A3Q3VQ40
			E	Takifugu rubripes	TAKRU29706		H2S5J5
			E	Tetraodon nigroviridis	TETNG02787		H3CBE4
			E	Oryzias javanicus	ORYJA43766		A0A3S2P7C8
			E	Oryzias latipes	ORYLA17744		ENSORLG00000011306
			E	Oryzias melastigma	ORYME10844		A0A3B3BTH0
			E	Nothobranchius furzeri	NOTFU27452		A0A1A8B308
			E	Kryptolebias marmoratus	KRYMA11239		A0A3Q2ZUU0
			E	Cyprinodon variegatus	CYPVA18452		A0A3Q2FRW6
			E	Gambusia affinis	GAMAF12464		ENSGAFG00000010026.1

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