Pairwise Orthologs for PANPA18009

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANPA18009 (A0A2R9C911)

E Pan paniscus | alpha-N-acetylgalactosaminide alpha-2,6-sialyltran [ST6GALNAC1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL22622		A0A9J7LRB6
			E	Procavia capensis	PROCA03927		ENSPCAG00000000468
			E	Loxodonta africana	LOXAF07187		G3SLK6
			E	Oryctolagus cuniculus	RABIT16954		G1U2C0
			E	Ochotona princeps	OCHPR04916		ENSOPRG00000011204
			E	Cavia aperea	CAVAP14718		ENSCAPG00000015693.1
			E	Cavia porcellus	CAVPO20213		H0UYJ0
			E	Chinchilla lanigera	CHILA20990		A0A8C2YN79
			E	Jaculus jaculus	JACJA06629		A0A8C5KM43
			E	Mus musculus	MOUSE03989		SIA7A_MOUSE
			E	Rattus norvegicus	RATNO02003		A6HKY7
			E	Nannospalax galili	NANGA08428		A0A8C6QPA6
			E	Chlorocebus sabaeus	CHLSB05609		A0A0D9QYH7
			E	Macaca fascicularis	MACFA14884		ENSMFAG00000041499.1
			E	Macaca mulatta	MACMU15778		F6YRJ5
			E	Macaca nemestrina	MACNE15281		A0A2K6BUH8
			E	Mandrillus leucophaeus	MANLE00220		A0A2K5Z0S2
			E	Colobus angolensis palliatus	COLAP03525		A0A2K5JUB7
			E	Rhinopithecus bieti	RHIBE06618		A0A2K6MZY2
			E	Rhinopithecus roxellana	RHIRO00722		A0A2K6N9W9
			E	Gorilla gorilla gorilla	GORGO35111		G3QCR6
			E	Homo sapiens	HUMAN36485		SIA7A_HUMAN
			E	Pan troglodytes	PANTR15505		A0A6D2XG63
			E	Pongo abelii	PONAB12498		H2NUU2
			E	Nomascus leucogenys	NOMLE08591		G1QQ31

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