Pairwise Orthologs for MOUSE59547

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene MOUSE59547 (ELAV1_MOUSE)

E Mus musculus | ELAV-like protein 1 [Elavl1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA01562		L8HG02
			E	Leptomonas seymouri	LEPSE07060		A0A0N1I120
			E	Trichomonas vaginalis G3	TRIVA23440		A2F425
			E	Aspergillus aculeatus	ASPAC08991		fgenesh1_pm.17_#_18
			E	Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O)	COCH512427		M2TGB9
			E	Komagataella phaffii (strain GS115 / ATCC 20864)	KOMPG01738		C4QX56
			E	Lachancea fermentati	LACFM00322		A0A1G4MBG7
			E	Petromyzon marinus	PETMA03199		S4RCA6
			E	Scyliorhinus torazame	SCYTO13361		A0A401NZ76
			E	Chiloscyllium punctatum	CHIPU10195		A0A401SN21
			E	Callorhinchus milii	CALMI27849		V9KJS3
			E	Lepisosteus oculatus	LEPOC06380		W5LW06
			E	Anabas testudineus	ANATE30075		ENSATEG00000007662.1
			E	Seriola dumerili	SERDU00376		A0A3B4UEI6
			E	Echeneis naucrates	ECHNA39933		A0A665V814
			E	Cynoglossus semilaevis	CYNSE16594		A0A3P8UT77
			E	Scophthalmus maximus	SCOMX10752		A0A8D3AVD6
			E	Dicentrarchus labrax	DICLA05760		XP_051250448
			E	Gasterosteus aculeatus	GASAC06576		G3P942
			E	Sparus aurata	SPAAU03987		A0A671VD46
			E	Mola mola	MOLML24640		A0A3Q3WT88
			E	Takifugu rubripes	TAKRU34077		A0A674PQC1
			E	Tetraodon nigroviridis	TETNG01700		H3DRE0
			E	Oryzias javanicus	ORYJA28987		ENSOJAG00000003827.1
			E	Oryzias latipes	ORYLA10222		ENSORLG00000012435

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