Pairwise Orthologs for ORYNI09703

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYNI09703 (A0A0E0J4F8)

E Oryza nivara | Uncharacterized protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691)	SCHCR01739		S9W3Y8
			E	Macadamia integrifolia	MACIN37919		XP_042482430
			E	Glycine max	SOYBN31684		K7MTY3
			E	Rosa chinensis	ROSCH16060		A0A2P6PY34
			E	Brassica napus	BRANA78003		BnaC07g35850D
			E	Brassica oleracea var. oleracea	BRAOL40649		A0A0D3DF10
			E	Brassica oleracea var. oleracea	BRAOL01629		A0A0D3A5I2
			E	Oryza glaberrima	ORYGL31187		I1QEE3
			E	Oryza punctata	ORYPU27261		A0A0E0LLP8
			E	Oryza sativa subsp. indica	ORYSI31643		A2YM83
			E	Beta vulgaris subsp. vulgaris	BETVV17974		BVRB_3g054750
			E	Ricinus communis	RICCO17169		XP_048230866
			E	Gossypium hirsutum	GOSHI42302		XP_016683587
			E	Pinus taeda	PINTA10836		PTA00056221
			E	Pinus taeda	PINTA14612		PTA00067285
			E	Pinus taeda	PINTA31307		PTA00034483
			E	Pinus taeda	PINTA40147		PTA00064723
			E	Pinus taeda	PINTA44149		PTA00040888
			E	Pinus taeda	PINTA52927		PTA00076883
			E	Pinus taeda	PINTA66370		PTA00002799
			E	Pinus taeda	PINTA69655		PTA00003076
			E	Oryza brachyantha	ORYBR25920		J3MLN0
			E	Oryza brachyantha	ORYBR25925		J3MLN5
			E	Annona cherimola	ANNCH20736		Anche102Chr5g0014600
			E	Annona cherimola	ANNCH20724		Anche102Chr5g0014510

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