Pairwise Orthologs for ORYME13959

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYME13959 (A0A3B3DUX7)

E Oryzias melastigma | Leucine rich repeat containing 3

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO05716		A0A401PCK6
			E	Chiloscyllium punctatum	CHIPU15287		A0A401T2M0
			E	Callorhinchus milii	CALMI11590		A0A4W3HSS0
			E	Lepisosteus oculatus	LEPOC03252		W5NMT1
			E	Anguilla anguilla	ANGAN48955		XP_035250140
			E	Anabas testudineus	ANATE24583		ENSATEG00000009820.1
			E	Seriola dumerili	SERDU02401		A0A3B4TZY7
			E	Echeneis naucrates	ECHNA12803		A0A665VFF2
			E	Scophthalmus maximus	SCOMX06463		A0A2U9C9S8
			E	Dicentrarchus labrax	DICLA12064		A0A8P4G7E0
			E	Gasterosteus aculeatus	GASAC10503		G3NC91
			E	Sparus aurata	SPAAU28304		A0A671W285
			E	Mola mola	MOLML10335		A0A3Q3W4T9
			E	Takifugu rubripes	TAKRU23942		H2SV73
			E	Tetraodon nigroviridis	TETNG08800		H3CTZ0
			E	Oryzias javanicus	ORYJA41017		ENSOJAG00000018052.1
			E	Oryzias latipes	ORYLA09665		ENSORLG00000014434
			E	Nothobranchius furzeri	NOTFU31780		A0A1A8A9T6
			E	Kryptolebias marmoratus	KRYMA20477		A0A3Q3BJP3
			E	Cyprinodon variegatus	CYPVA17031		A0A3Q2FID6
			E	Gambusia affinis	GAMAF22689		ENSGAFG00000010289.1
			E	Poecilia formosa	POEFO05974		A0A087YQH9
			E	Poecilia reticulata	POERE23432		A0A3P9Q9F4
			E	Xiphophorus maculatus	XIPMA32531		M4B0L2
			E	Salarias fasciatus	SALFA51351		A0A672IBV6

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