Pairwise Orthologs for ORYLA19729

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYLA19729 (ENSORLG00000019720)

E Oryzias latipes

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Trichomonas vaginalis G3	TRIVA16750		A2EJY5
			E	Purpureocillium lilacinum	PURLI07232		A0A179GPD5
			E	Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5)	TETPH01389		G8BX46
			E	Branchiostoma floridae	BRAFL08642		A0A9J7MK72
			E	Branchiostoma lanceolatum	BRALA24371		BL10432
			E	Chiloscyllium punctatum	CHIPU04869		A0A401S7V6
			E	Callorhinchus milii	CALMI21424		A0A4W3HJQ2
			E	Lepisosteus oculatus	LEPOC12895		W5N1E1
			E	Anguilla anguilla	ANGAN18624		XP_035272812
			E	Anabas testudineus	ANATE11389		A0A3Q1IPV1
			E	Seriola dumerili	SERDU01183		A0A3B4VFA5
			E	Echeneis naucrates	ECHNA40584		A0A665W9T2
			E	Cynoglossus semilaevis	CYNSE17700		A0A3P8UWF2
			E	Scophthalmus maximus	SCOMX11590		ENSSMAG00000013483.1
			E	Dicentrarchus labrax	DICLA04213		A0A8C4NPH2
			E	Gasterosteus aculeatus	GASAC01189		G3NB74
			E	Sparus aurata	SPAAU04968		A0A671X817
			E	Mola mola	MOLML25830		A0A3Q4BSJ9
			E	Takifugu rubripes	TAKRU35664		A0A674P2X6
			E	Tetraodon nigroviridis	TETNG16327		H3CIK3
			E	Oryzias melastigma	ORYME10182		A0A3B3D790
			E	Nothobranchius furzeri	NOTFU24795		enpep
			E	Kryptolebias marmoratus	KRYMA23650		A0A3Q3AGE5
			E	Cyprinodon variegatus	CYPVA24749		A0A3Q2CHW4
			E	Gambusia affinis	GAMAF08509		ENSGAFG00000004343.1

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