Pairwise Orthologs for ORYLA15021

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYLA15021 (ENSORLG00000009509)

E Oryzias latipes

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Lepisosteus oculatus	LEPOC16701	1:1	W5NHY8
			E	Anguilla anguilla	ANGAN26332	1:1	XP_035280813
			E	Anabas testudineus	ANATE22104	1:1	A0A3Q1H714
			E	Seriola dumerili	SERDU10683	1:1	A0A3B4UKX6
			E	Echeneis naucrates	ECHNA53842	1:1	A0A665V6B0
			E	Scophthalmus maximus	SCOMX00918	1:1	A0A2U9BWS9
			E	Dicentrarchus labrax	DICLA41615	1:1	A0A8C4I3D4
			E	Gasterosteus aculeatus	GASAC15811	1:1	G3PGQ7
			E	Sparus aurata	SPAAU43030	1:1	A0A671U7L7
			E	Mola mola	MOLML15812	1:1	A0A3Q3WPK0
			E	Takifugu rubripes	TAKRU52223	1:1	A0A674P125
			E	Tetraodon nigroviridis	TETNG03705	1:1	H3DPE7
			E	Oryzias javanicus	ORYJA31743	1:1	A0A437D9P3
			E	Oryzias melastigma	ORYME03740	1:1	A0A3B3D821
			E	Nothobranchius furzeri	NOTFU21148	1:1	A0A9D3C050
			E	Kryptolebias marmoratus	KRYMA03120	1:1	A0A3Q3B2T6
			E	Cyprinodon variegatus	CYPVA24872	1:1	A0A3Q2DJ48
			E	Gambusia affinis	GAMAF20600	1:1	ENSGAFG00000004610.1
			E	Poecilia formosa	POEFO02703	1:1	A0A087YKH5
			E	Poecilia reticulata	POERE28379	1:1	A0A3P9PG63

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